ci: use rocker container with shell git checkout
R-CMD-check / R CMD check (push) Failing after 2m13s
R-CMD-check / R CMD check (push) Failing after 2m13s
Replace actions/checkout@v4 (JS action, requires Node.js) with plain git commands using the auto-injected gitea.token for auth. This lets the workflow run entirely inside rocker/r-ver:4.4 without any Node.js dependency.
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+14
-12
@@ -10,24 +10,26 @@ jobs:
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check:
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name: R CMD check
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runs-on: ubuntu-latest
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container: rocker/r-ver:4.4
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steps:
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- uses: actions/checkout@v4
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- name: Set up R
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# Plain git checkout — no Node.js required, works in any container.
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# gitea.token is automatically injected by the runner for auth.
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- name: Check out code
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env:
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REPO_TOKEN: ${{ gitea.token }}
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run: |
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sudo apt-get update -qq
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sudo apt-get install -y --no-install-recommends software-properties-common dirmngr
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wget -qO- https://cloud.r-project.org/bin/linux/ubuntu/marutter_pubkey.asc \
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| sudo tee -a /etc/apt/trusted.gpg.d/cran_ubuntu_key.asc
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sudo add-apt-repository \
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"deb https://cloud.r-project.org/bin/linux/ubuntu $(lsb_release -cs)-cran40/"
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sudo apt-get update -qq
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sudo apt-get install -y --no-install-recommends r-base r-base-dev
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apt-get update -qq && apt-get install -y --no-install-recommends git
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git config --global --add safe.directory "$PWD"
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git init
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git remote add origin \
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"https://oauth2:${REPO_TOKEN}@gitea.civilytics.org/${{ gitea.repository }}.git"
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git fetch --depth=1 origin "${{ gitea.sha }}"
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git checkout FETCH_HEAD
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- name: Install system dependencies
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run: |
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sudo apt-get install -y --no-install-recommends \
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apt-get install -y --no-install-recommends \
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libcurl4-openssl-dev \
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libssl-dev \
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libxml2-dev \
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