Commit Graph
3 Commits
Author SHA1 Message Date
jared 0dd3f15ada fix(ci): use knitr::rmarkdown vignette engine + ignore gitea/CLAUDE
R-CMD-check / check (push) Successful in 1m44s
R CMD build (run by rcmdcheck before R CMD check) rebuilds vignettes
from source regardless of --no-vignettes. Our vignette declared
%\VignetteEngine{knitr::knitr} which requires the 'markdown' package
that isn't in CI's dependency tree. Switch to %\VignetteEngine{knitr::rmarkdown},
which uses the already-Suggests-listed 'rmarkdown' package and matches
the output: rmarkdown::html_vignette directive in the YAML header.

Also add ^\.gitea$ and ^CLAUDE\.md$ to .Rbuildignore so R CMD check
stops emitting the "hidden file" / "non-standard top-level file" notes.

Local rcmdcheck (mirroring CI's exact args) now reports
0 errors / 0 warnings / 0 notes.

The pdflatex notice in the build log is unrelated — R CMD build prints
"Not building PDF manual" and continues; with --no-manual it's silenced
entirely.
2026-04-29 19:25:16 -04:00
jared c46354f049 docs(vignette): population denominators rationale + usage
Explains the four population sources, why F-33 is the default, type-4/5
coverage gap, the popyear quirk, and how to build moving-window peer
cohorts manually.
2026-04-29 19:05:38 -04:00
jared f7035049e7 feat: package skeleton — DESCRIPTION, NAMESPACE, session/manifest/cache/views
Minimal skeleton for uscogdata v0.1. Internal session layer with lazy
cog_open(), manifest fetch+validate+cache, view registration placeholder.
Depends on DuckDB >=1.0, httr2, jsonlite. inst/schemas/provenance-v1.json
ships the structured provenance JSON Schema.
2026-04-23 09:05:54 -04:00