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jared 5f81ae386b chore: CI badge, mirror PR explainer, and the tag-pin release step (#47)
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Three items #47 absorbed from #46, held back so a dead badge would not sit
beside an unresolved r-universe one. Both resolve now that v0.4.0 is tagged.

- R-CMD-check badge pointing at the GitHub mirror's workflow, where the
  4-platform matrix actually runs.

- A pull_request_target workflow explaining the mirror flow on every incoming
  PR. A PR here is landed on Gitea and syncs back, and because the merge
  preserves the contributor's commits at their original SHAs, GitHub marks the
  PR 'Merged' with nobody visibly clicking Merge. To a first-time contributor
  that reads as rejection. Say so before it happens.

  pull_request_target rather than pull_request because a fork PR's token is
  read-only under the latter -- it could not comment, which is the entire job.
  That is only safe because this never checks out or runs contributor code; the
  file says so and says not to add a checkout.

- CONTRIBUTING's release checklist now spells out that the tag goes on Gitea and
  the mirror carries it, and that r-universe does NOT pick up a release until
  packages.json's branch pin is edited. '*release' would automate it but needs a
  GitHub Release object, and the mirror pushes tags only -- so it would silently
  never update. Learned while doing this release.
2026-08-10 19:47:26 -04:00
jared d2caa6de97 Merge pull request 'docs: re-measure the corpus-access table against the published corpus (#56)' (#65) from docs/readme-perf-remeasure-56 into main
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2026-08-10 19:36:42 -04:00
jared 303aa59b07 docs: order the 0.4.0 NEWS sections by user impact, not merge order
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The three 0.4.0 features landed in the order their PRs merged, which buried the
headline change (cohort predicates, 4.8x) below an operator config knob and a
documentation note. Reordered to: cohorts, pagination, DuckDB budget, docs,
Fixes -- with Fixes last, where it was already.

The stacked PRs each appended their own '## Fixes' heading, so resolving the
conflicts also folded two of them into the single section that belongs there.

Content is byte-identical to what merged; only section order changed. Verified
by diffing the sorted non-blank lines against the previous commit.
2026-08-10 19:29:43 -04:00
jared 81f72321ee docs: re-measure the corpus-access table against the published corpus (#56)
figures predate the row-group rechunk (cog_pipeline#93, published 2026-08-09)
and reported the mirrored column as 'local speed' with no number -- hiding the
largest difference available to a user.

Measured 2026-08-10, fresh R session per arm, against the live corpus at
pipeline_commit 3d28ddd. Madison WI, 16-core Linux workstation.

Three findings the old table could not express:

- A local mirror is 60-80x faster. A one-off question is ~12 s end to end
  remotely against ~0.15 s mirrored. Stated outright now, because it is a
  bigger and cheaper win for users than anything in the R code.

- Opening the session is the LARGEST remote cost (~7.5 s), bigger than any
  individual query, and it lands on the user's first query rather than on
  library(). The old table accounted for it nowhere, so every per-query figure
  was quietly missing it.

- The remote cost is round-trips, not scanning: a repeat query over
  already-touched partitions is ~1.5 s against ~4 s cold, and a full-history
  query costs ~7 s whether it runs first or last (verified by running the arms
  in both orders). This is why #93's 1.4-1.7x, measured through cog-api against
  a local mount, does not show up on the remote path -- there, network latency
  swamps scan time.

Corpus size corrected to ~201 MB: row-group chunking added ~3.4%, and 190.6 was
ambiguous between MB and MiB besides. Measured from the manifest and on disk.
The 0.3.0 NEWS section keeps 190.6 -- it was correct for that release.

Also documented HTTP 429: a burst of remote queries gets rate-limited by the
host. Hit while taking these measurements.
2026-08-10 19:29:05 -04:00
jared 5cb83d8f1d Merge pull request 'feat: limit/offset on cog_gov_search() and cog_balances() (#57)' (#63) from feat/pagination-search-balances-57 into main
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2026-08-10 19:28:09 -04:00
jared 2bb9d41d72 feat: limit/offset on cog_gov_search() and cog_balances() (#57)
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verbs were left materializing everything and slicing in R -- the pattern behind
the 2026-08-06 production incident. cog_gov_search() had no LIMIT at all, so an
unfiltered call returns the entire 40,336-row crosswalk.

Extracted the #39 machinery into R/pagination.R first (.validate_pagination(),
.paginate_sql(), .take_pagination_total()) rather than growing a third inline
copy: three definitions of what total_rows means is three places for it to
drift. Conflict refusals stay at the call sites because each verb's conflict
set differs. .verb_spendrev() now uses the shared helpers and is unchanged in
behaviour.

The empty-page fallback query is now passed as a thunk, so the unpaginated SQL
is only BUILT when an offset actually lands past the end instead of on every
paged call.

Two things #57 did not anticipate:

- cog_gov_search()'s ORDER BY was not a total order. population_acs DESC NULLS
  LAST leaves ties -- and the whole NULL block -- in scan order, so two requests
  can order them differently and a paged sweep duplicates one row while dropping
  another. Added canonical_govid as tiebreaker. Unpaginated output changes only
  in the relative order of already-tied rows.

- Basket mode returns one resolved row per requested name plus a sidecar
  covering all of them, so a page of it is not a page of anything the caller
  asked for. Refused with uscogdata_basket_pagination_conflict rather than
  silently ignoring the arguments.

Both default to NULL, so cog-api adopts them behind its existing formals()
probe with no lockstep deploy.

Suite: 1067 passed, 0 failed, 0 warnings (2 pre-existing live-corpus skips).
2026-08-10 19:27:11 -04:00
jared 700ae93c9c Merge pull request 'feat: cog_open() honours a DuckDB thread and memory budget (#60)' (#62) from feat/duckdb-threads-60 into main
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Reviewed-on: #62
2026-08-10 19:23:14 -04:00
11 changed files with 580 additions and 84 deletions
+64
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@@ -0,0 +1,64 @@
# Explain the mirror contribution flow on every incoming pull request.
#
# This repository is a MIRROR. A PR opened here is landed on the canonical Gitea
# repository and syncs back; because the merge preserves the contributor's
# commits at their original SHAs, GitHub marks the PR "Merged" on its own as
# soon as the mirror syncs -- with nobody visibly clicking Merge.
#
# Without this comment, that reads as a rejection: the contributor sees their PR
# close with no review, no merge button pressed, and no explanation. It is
# actually the successful outcome. Say so up front, before it happens.
#
# WHY pull_request_target AND NOT pull_request:
# a `pull_request` run from a fork gets a read-only token, so it cannot post a
# comment -- which is exactly the case this workflow exists to serve.
# `pull_request_target` runs in the context of the BASE repo and gets a writable
# token. That is only safe because this job never checks out or executes the
# contributor's code; it posts a fixed string. Do not add a checkout of
# `github.event.pull_request.head.sha` here -- that combination is the standard
# pull_request_target privilege-escalation hole.
name: Explain the mirror flow
on:
pull_request_target:
types: [opened]
permissions:
pull-requests: write
jobs:
comment:
runs-on: ubuntu-latest
steps:
- name: Post the contribution-flow explainer
uses: actions/github-script@v7
with:
script: |
const body = [
"Thanks for this — and one thing worth knowing before it happens.",
"",
"**This repository is a mirror.** Development happens on Gitea at",
"`gitea.civilytics.org/Civilytics/uscogdata`. Your pull request will be fetched",
"from here, landed there, and synced back.",
"",
"Because that merge preserves your commits at their original SHAs, **GitHub will",
"mark this pull request \"Merged\" on its own** — without anyone visibly clicking",
"the Merge button, and possibly without a review comment on this page first.",
"",
"> If your pull request closes as \"Merged\" and nobody appears to have merged it,",
"> that is the normal, successful outcome — not a rejection.",
"",
"If it is *not* going to be merged, you will get an actual reply saying so.",
"",
"Substantial contributions get a `ctb` entry in `DESCRIPTION`, which surfaces in",
"`citation(\"uscogdata\")`. There is no CLA and no DCO sign-off.",
"",
"Full details: [CONTRIBUTING.md](https://github.com/civilytics/uscogdata/blob/main/CONTRIBUTING.md).",
].join("\n");
await github.rest.issues.createComment({
owner: context.repo.owner,
repo: context.repo.repo,
issue_number: context.payload.pull_request.number,
body,
});
+10 -2
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@@ -101,5 +101,13 @@ but "usually" is not a release gate.
variables set. This is the only check that catches a variables set. This is the only check that catches a
corpus-unreachable defect, and its absence is why 0.3.0 needed fixing. corpus-unreachable defect, and its absence is why 0.3.0 needed fixing.
8. Bump `Version` and add a `NEWS.md` section. 8. Bump `Version` and add a `NEWS.md` section.
9. Tag, then update the r-universe registry pin at 9. Tag on **Gitea** (`git tag -a vX.Y.Z && git push origin vX.Y.Z`). The mirror
`github.com/civilytics/civilytics.r-universe.dev`. workflow carries tags to GitHub on its own — confirm the tag appears at
`github.com/civilytics/uscogdata/tags` before continuing.
10. Update the r-universe registry pin at
`github.com/civilytics/civilytics.r-universe.dev` — edit `packages.json`'s
`branch` to the new tag. **r-universe will not pick up a release until this
is edited**: the pin is a tag, deliberately, so a mid-refactor `main` is
never published as a release. `"branch": "*release"` would track releases
automatically, but it needs a GitHub *Release* object and the mirror pushes
tags only — so it would silently never update.
+73 -19
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@@ -1,24 +1,5 @@
# uscogdata 0.4.0 # uscogdata 0.4.0
## DuckDB's resource budget is configurable
`USCOGDATA_DUCKDB_THREADS` and `USCOGDATA_DUCKDB_MEMORY_LIMIT` (with matching
`options(uscogdata.duckdb_threads = )` / `options(uscogdata.duckdb_memory_limit = )`
spellings) cap the DuckDB connection the package opens. Both follow the same
env-var > option > default precedence as `USCOGDATA_URL`.
Unset, **no pragma is issued at all** and DuckDB's own defaults apply exactly as
before -- every visible core. That is right for one interactive session on a
dedicated machine and wrong for a server: where several readers share a host, each
otherwise claims the whole machine and they contend. Capping measured ~5% on a
single-government all-years query (502 ms at 2 threads vs 475 ms uncapped on 16
cores), which is cheap enough that a server should always cap.
This replaces a workaround in which a consumer reached into the package namespace
at boot -- `getFromNamespace(".ensure_session", "uscogdata")()` followed by a manual
`SET threads` -- depending both on a private name and on the session already being
open.
## Cohorts can be named by predicate, not just by id ## Cohorts can be named by predicate, not just by id
`cog_spending()`, `cog_revenue()` and `cog_balances()` gain optional `state` `cog_spending()`, `cog_revenue()` and `cog_balances()` gain optional `state`
@@ -65,8 +46,81 @@ When the cohort is named by predicate there is no id list to report, so
`provenance$scope$cohort` carries `state`, `type` and `n_governments` instead. `provenance$scope$cohort` carries `state`, `type` and `n_governments` instead.
A `govid`-named cohort's provenance is unchanged. A `govid`-named cohort's provenance is unchanged.
## `cog_gov_search()` and `cog_balances()` gain `limit`/`offset`
Pagination arrived on `cog_spending()`/`cog_revenue()` in 0.3.0; the other two
verbs were left materializing everything and slicing in R. Both now take
`limit`/`offset` with the same semantics: `NULL` default, the page applied in
SQL behind a deterministic `ORDER BY`, and the unpaginated count returned as a
`total_rows` attribute computed by `COUNT(*) OVER()` in the same scan rather
than a second query.
`cog_gov_search()` had no `LIMIT` at all, which made it the one verb that
returns the entire 40,336-row crosswalk when called with no filter.
Two refusals rather than silent surprises:
* `cog_balances(recipe = , limit = )` aborts with class
`uscogdata_recipe_pagination_conflict` -- a recipe's result comes from a
separate query that pagination is not wired into.
* `cog_gov_search()` in basket mode (`length(name) > 1`) aborts with class
`uscogdata_basket_pagination_conflict`. Basket mode returns one resolved row
per requested name with a sidecar covering all of them; a page of that is not
a page of anything the caller asked for.
## DuckDB's resource budget is configurable
`USCOGDATA_DUCKDB_THREADS` and `USCOGDATA_DUCKDB_MEMORY_LIMIT` (with matching
`options(uscogdata.duckdb_threads = )` / `options(uscogdata.duckdb_memory_limit = )`
spellings) cap the DuckDB connection the package opens. Both follow the same
env-var > option > default precedence as `USCOGDATA_URL`.
Unset, **no pragma is issued at all** and DuckDB's own defaults apply exactly as
before -- every visible core. That is right for one interactive session on a
dedicated machine and wrong for a server: where several readers share a host, each
otherwise claims the whole machine and they contend. Capping measured ~5% on a
single-government all-years query (502 ms at 2 threads vs 475 ms uncapped on 16
cores), which is cheap enough that a server should always cap.
This replaces a workaround in which a consumer reached into the package namespace
at boot -- `getFromNamespace(".ensure_session", "uscogdata")()` followed by a manual
`SET threads` -- depending both on a private name and on the session already being
open.
## Documentation: the corpus-access table is re-measured and honest
The README's "two ways to read the corpus" table carried figures taken before
the corpus was re-chunked into row groups (cog_pipeline#93, published
2026-08-09) and reported the mirrored column as "local speed" with no number at
all. Re-measured 2026-08-10 against the published corpus (`pipeline_commit
3d28ddd`), fresh R session per arm:
* **A local mirror is roughly 60-80x faster.** A one-off question costs ~12 s
end to end remotely against ~0.15 s mirrored. That is the largest single
difference available to a user and it is now stated outright rather than left
as "local speed".
* **Opening the session is the largest remote cost** (~7.5 s -- manifest fetch
plus 23 view registrations over HTTPS), larger than any individual query, and
it lands on the first query rather than on `library(uscogdata)`. The old table
did not account for it anywhere.
* **The remote cost is round-trips, not scanning.** A repeat query over
already-touched partitions is ~1.5 s against ~4 s cold, and a full-history
query costs ~7 s whether it runs first or last.
* The corpus size is **~201 MB**, not 190.6 MB -- row-group chunking added ~3.4%
and the old figure was ambiguous between MB and MiB besides.
* Documented that a burst of remote queries can be rate-limited by the host
(`HTTP 429`), which is another reason to mirror for real work.
## Fixes ## Fixes
* `cog_gov_search()` now orders by `population_acs DESC NULLS LAST,
canonical_govid`. **`population_acs` alone is not a total order** -- ties, and
the entire `NULLS LAST` block, came back in whatever order the scan produced.
That was invisible while every call returned the full result set, but it makes
a paged sweep unsound: two requests can order tied rows differently, so a row
is duplicated on one page and missing from the next. Unpaginated results are
unchanged except for the relative order of rows that were already tied.
* An unknown `state` abbreviation now aborts with "Unknown state abbreviation" * An unknown `state` abbreviation now aborts with "Unknown state abbreviation"
(class `uscogdata_unknown_state`) instead of base R's "subscript out of (class `uscogdata_unknown_state`) instead of base R's "subscript out of
bounds". `.state_abbrev_to_fips` is a named character vector, so `[[` on an bounds". `.state_abbrev_to_fips` is a named character vector, so `[[` on an
+41 -2
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@@ -47,6 +47,12 @@
#' @param recipe Optional harmonization recipe id (see [cog_recipes()]). #' @param recipe Optional harmonization recipe id (see [cog_recipes()]).
#' `"cash_securities_z77_wide"` and `"cash_securities_z78_wide"` bridge the #' `"cash_securities_z77_wide"` and `"cash_securities_z78_wide"` bridge the
#' wide era to the modern one. #' wide era to the modern one.
#' @param limit Maximum number of result rows to return, pushed into the SQL
#' rather than applied after materializing every row. `NULL` (default)
#' returns everything. Cannot be combined with `recipe` -- see `offset` and
#' `total_rows`.
#' @param offset Rows to skip before `limit` starts counting (0-based).
#' Ignored if `limit` is `NULL`; defaults to `0L` when `limit` is set.
#' #'
#' @return Tibble with columns `year`, `canonical_govid`, `gov_name`, #' @return Tibble with columns `year`, `canonical_govid`, `gov_name`,
#' `balance_subtype`, `category`, `amt_nominal`, `codes_included`, #' `balance_subtype`, `category`, `amt_nominal`, `codes_included`,
@@ -64,11 +70,16 @@
#' and `truncated` (the observed subtypes whose coverage falls short of the #' and `truncated` (the observed subtypes whose coverage falls short of the
#' requested years). `expenditure_concept`/`revenue_concept` are `NA` -- #' requested years). `expenditure_concept`/`revenue_concept` are `NA` --
#' holdings are a stock, not a flow, so neither concept vocabulary applies. #' holdings are a stock, not a flow, so neither concept vocabulary applies.
#'
#' When `limit` is set, also carries a `total_rows` attribute: the full
#' unpaginated row count, computed by the same query (`COUNT(*) OVER()`)
#' rather than a second scan.
#' @export #' @export
cog_balances <- function(govid = NULL, years, category = NULL, cog_balances <- function(govid = NULL, years, category = NULL,
per_capita = FALSE, adjust_to_year = NULL, per_capita = FALSE, adjust_to_year = NULL,
basis = c("harmonized", "raw"), recipe = NULL, basis = c("harmonized", "raw"), recipe = NULL,
state = NULL, type = NULL) { state = NULL, type = NULL,
limit = NULL, offset = NULL) {
call <- match.call() call <- match.call()
basis <- match.arg(basis, c("harmonized", "raw")) basis <- match.arg(basis, c("harmonized", "raw"))
# Coerce FIRST, validate second: .validate_verb_inputs() asserts # Coerce FIRST, validate second: .validate_verb_inputs() asserts
@@ -91,6 +102,22 @@ cog_balances <- function(govid = NULL, years, category = NULL,
# validator's own doc comment for the incident that made that matter. # validator's own doc comment for the incident that made that matter.
.validate_verb_inputs(govid, years, category, per_capita, adjust_to_year, .validate_verb_inputs(govid, years, category, per_capita, adjust_to_year,
recipe) recipe)
# Same semantics as the money verbs (R/pagination.R). Only the `recipe`
# conflict applies here: cog_balances() has no `complete` argument, and a
# recipe's result comes from .run_recipe()'s own query, which pagination is
# not wired into.
paging <- .validate_pagination(limit, offset)
limit <- paging$limit
offset <- paging$offset
if (!is.null(limit) && !is.null(recipe)) {
cli::cli_abort(c(
"`limit`/`offset` cannot be combined with `recipe`.",
"i" = "A recipe's result comes from a separate query (`.run_recipe()`) that pagination is not wired into yet.",
"*" = "Drop `limit`/`offset`, or drop `recipe`."
), class = "uscogdata_recipe_pagination_conflict")
}
years <- as.integer(years) years <- as.integer(years)
if (!is.null(adjust_to_year)) adjust_to_year <- as.integer(adjust_to_year) if (!is.null(adjust_to_year)) adjust_to_year <- as.integer(adjust_to_year)
@@ -108,6 +135,7 @@ cog_balances <- function(govid = NULL, years, category = NULL,
manifest <- .uscogdata_env$manifest manifest <- .uscogdata_env$manifest
recipe_block <- NULL recipe_block <- NULL
category_for_prov <- category category_for_prov <- category
total_rows <- NULL # set below only when limit is non-NULL (non-recipe path)
if (!is.null(recipe)) { if (!is.null(recipe)) {
.require_schema_v5(con, manifest, "recipe =") .require_schema_v5(con, manifest, "recipe =")
@@ -125,8 +153,18 @@ cog_balances <- function(govid = NULL, years, category = NULL,
} else { } else {
sql <- .build_verb_sql("balance_annotated", "balance_subtype", sql <- .build_verb_sql("balance_annotated", "balance_subtype",
cohort, years, category, cohort, years, category,
ig_view = NULL, subtype_scope = NULL) ig_view = NULL, subtype_scope = NULL,
limit = limit, offset = offset)
result <- tibble::as_tibble(DBI::dbGetQuery(con, sql)) result <- tibble::as_tibble(DBI::dbGetQuery(con, sql))
if (!is.null(limit)) {
paged <- .take_pagination_total(result, con, function() {
.build_verb_sql("balance_annotated", "balance_subtype",
cohort, years, category,
ig_view = NULL, subtype_scope = NULL)
})
result <- paged$result
total_rows <- paged$total_rows
}
} }
# Order matters (matches .verb_spendrev()): per-capita first, so # Order matters (matches .verb_spendrev()): per-capita first, so
@@ -158,6 +196,7 @@ cog_balances <- function(govid = NULL, years, category = NULL,
.emit_balance_caveats(prov$balance_caveats) .emit_balance_caveats(prov$balance_caveats)
attr(result, "provenance") <- prov attr(result, "provenance") <- prov
if (!is.null(limit)) attr(result, "total_rows") <- total_rows
result result
} }
+81
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@@ -0,0 +1,81 @@
# R/pagination.R
#
# Shared limit/offset machinery. #39 established the semantics inside
# .verb_spendrev(); #57 extends them to cog_gov_search() and cog_balances(),
# which is what made a single definition worth having: three inline copies of
# "coerce, refuse, unwrap the count" would be three places for the meaning of
# `total_rows` to drift.
#
# The SQL side stays in .build_verb_sql() (R/spending.R) -- it already wraps
# the aggregate in an outer SELECT so COUNT(*) OVER() sees the post-GROUP-BY
# row count rather than the pre-aggregation one, and that is the subtle part
# worth not duplicating either.
#' Coerce and check a limit/offset pair.
#'
#' Returns the coerced pair, or NULL for `limit` when no page was requested.
#' `offset` defaults to 0 whenever `limit` is set, so a caller can supply just
#' `limit` and get the first page.
#'
#' Conflicts with other arguments are deliberately NOT checked here: they
#' differ per verb (`complete`/`recipe` for the money verbs, basket mode for
#' `cog_gov_search()`, `recipe` alone for `cog_balances()`), and a shared
#' function taking a list of conflict flags would be harder to read than the
#' three explicit refusals at the call sites.
#' @noRd
.validate_pagination <- function(limit, offset) {
if (is.null(limit)) {
return(list(limit = NULL, offset = NULL))
}
limit <- as.integer(limit)
if (length(limit) != 1L || is.na(limit) || limit < 0L) {
cli::cli_abort("`limit` must be a single non-negative integer.",
class = "uscogdata_invalid_pagination")
}
offset <- if (is.null(offset)) 0L else as.integer(offset)
if (length(offset) != 1L || is.na(offset) || offset < 0L) {
cli::cli_abort("`offset` must be a single non-negative integer.",
class = "uscogdata_invalid_pagination")
}
list(limit = limit, offset = offset)
}
#' Wrap a query so one page comes back carrying the unpaginated total.
#'
#' `COUNT(*) OVER()` rides along as an ordinary column, so the caller gets the
#' true total from the SAME scan instead of a second round trip. The outer
#' `SELECT *` matters: appending LIMIT/OFFSET directly to a grouped query would
#' have the window function count pre-aggregation rows.
#' @noRd
.paginate_sql <- function(base_sql, limit, offset) {
if (is.null(limit)) return(base_sql)
sprintf(
"SELECT *, COUNT(*) OVER() AS pagination_total_rows
FROM (%s) AS _paged
LIMIT %d OFFSET %d",
base_sql, limit, offset
)
}
#' Strip the count column back out and report the unpaginated total.
#'
#' Returns `list(result = , total_rows = )`.
#'
#' An empty page -- an offset past the end -- carries no row to read the window
#' function off, so that one case falls back to a second, unpaginated
#' `COUNT(*)` rather than reporting a wrong zero. `unpaged_sql` is passed as a
#' function so the fallback query is only BUILT when it is actually needed;
#' every caller's unpaginated SQL is otherwise constructed on every paged call
#' and thrown away.
#' @noRd
.take_pagination_total <- function(result, con, unpaged_sql) {
if (nrow(result) > 0L) {
total <- result$pagination_total_rows[[1]]
result$pagination_total_rows <- NULL
return(list(result = result, total_rows = as.integer(total)))
}
count_sql <- sprintf("SELECT COUNT(*) AS n FROM (%s) AS _uncounted",
if (is.function(unpaged_sql)) unpaged_sql() else unpaged_sql)
list(result = result,
total_rows = as.integer(DBI::dbGetQuery(con, count_sql)$n[[1]]))
}
+50 -7
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@@ -44,10 +44,22 @@
#' in basket mode (recycles from length 1). Excluded types `4`/`5` (or #' in basket mode (recycles from length 1). Excluded types `4`/`5` (or
#' `"special_district"` / `"school_district"`) trigger an explanatory #' `"special_district"` / `"school_district"`) trigger an explanatory
#' message and an empty result. #' message and an empty result.
#' @param limit Maximum number of rows to return, applied in SQL. `NULL`
#' (default) returns every match -- which, with no other filter, is the
#' entire crosswalk. Utility mode only: pagination has no meaning in basket
#' mode, where the result is one resolved row per requested name in input
#' order, and is refused there with class
#' `uscogdata_basket_pagination_conflict`.
#' @param offset Rows to skip before `limit` starts counting (0-based).
#' Ignored if `limit` is `NULL`; defaults to `0L` when `limit` is set.
#' @return A tibble of `canonical_fips_xwalk` rows. In utility mode, all #' @return A tibble of `canonical_fips_xwalk` rows. In utility mode, all
#' matches sorted by `population_acs` desc. In basket mode, resolved #' matches sorted by `population_acs` desc, ties broken by
#' rows in input order, with `attr(., "resolution")` set to the #' `canonical_govid`. In basket mode, resolved rows in input order, with
#' sidecar tibble. #' `attr(., "resolution")` set to the sidecar tibble.
#'
#' When `limit` is set, carries a `total_rows` attribute: the full
#' unpaginated match count, computed by the same query (`COUNT(*) OVER()`)
#' rather than a second scan.
#' @seealso [cog_basket_resolution()], [cog_basket_unresolved()], #' @seealso [cog_basket_resolution()], [cog_basket_unresolved()],
#' [cog_spending()], [cog_revenue()]. #' [cog_spending()], [cog_revenue()].
#' @examples #' @examples
@@ -82,7 +94,12 @@
#' ) #' )
#' } #' }
#' @export #' @export
cog_gov_search <- function(name = NULL, state = NULL, type = NULL) { cog_gov_search <- function(name = NULL, state = NULL, type = NULL,
limit = NULL, offset = NULL) {
paging <- .validate_pagination(limit, offset)
limit <- paging$limit
offset <- paging$offset
if (!is.null(type) && length(type) == 1L && .is_excluded_type(type)) { if (!is.null(type) && length(type) == 1L && .is_excluded_type(type)) {
cli::cli_inform(c( cli::cli_inform(c(
i = "v0.1 covers gov_types 0-3 (state/county/city/township) only.", i = "v0.1 covers gov_types 0-3 (state/county/city/township) only.",
@@ -94,6 +111,18 @@ cog_gov_search <- function(name = NULL, state = NULL, type = NULL) {
con <- .ensure_session() con <- .ensure_session()
if (length(name) > 1L) { if (length(name) > 1L) {
# Basket mode returns one resolved row per requested name, in input order,
# with a resolution sidecar describing how each was matched. A page of that
# is not a page of anything the caller asked for -- the sidecar would still
# describe every name -- so refuse rather than silently ignoring the
# arguments. Same shape as the recipe/complete refusals in .verb_spendrev().
if (!is.null(limit)) {
cli::cli_abort(c(
"`limit`/`offset` cannot be combined with basket mode.",
"i" = "Basket mode ({.code length(name) > 1}) returns one resolved row per requested name, in input order, with a resolution sidecar covering all of them.",
"*" = "Drop `limit`/`offset`, or search one name at a time."
), class = "uscogdata_basket_pagination_conflict")
}
return(.resolve_basket(name = name, state = state, type = type, con = con)) return(.resolve_basket(name = name, state = state, type = type, con = con))
} }
@@ -123,12 +152,26 @@ cog_gov_search <- function(name = NULL, state = NULL, type = NULL) {
} }
where <- if (length(preds) == 0L) "" else paste("WHERE", paste(preds, collapse = " AND ")) where <- if (length(preds) == 0L) "" else paste("WHERE", paste(preds, collapse = " AND "))
sql <- paste( # canonical_govid breaks ties. population_acs alone is NOT a total order --
# governments sharing a population, and the whole NULLS LAST block, came back
# in whatever order the scan produced. That was invisible while every call
# returned the full result set, but it makes a paged sweep unsound: two
# requests can order the tied rows differently, so a row is duplicated on one
# page and missing from the next. Any pagination has to sit on a total order.
base_sql <- paste(
"SELECT * FROM canonical_fips_xwalk", "SELECT * FROM canonical_fips_xwalk",
where, where,
"ORDER BY population_acs DESC NULLS LAST" "ORDER BY population_acs DESC NULLS LAST, canonical_govid"
) )
tibble::as_tibble(DBI::dbGetQuery(con, sql)) result <- tibble::as_tibble(
DBI::dbGetQuery(con, .paginate_sql(base_sql, limit, offset))
)
if (is.null(limit)) return(result)
paged <- .take_pagination_total(result, con, base_sql)
out <- paged$result
attr(out, "total_rows") <- paged$total_rows
out
} }
#' @noRd #' @noRd
+14 -44
View File
@@ -398,17 +398,10 @@ cog_spending <- function(govid = NULL, years, category = NULL,
# up front rather than silently ignored: complete = TRUE fills a grid over # up front rather than silently ignored: complete = TRUE fills a grid over
# the FULL requested (year, category) space, and a recipe's result comes # the FULL requested (year, category) space, and a recipe's result comes
# from .run_recipe()'s own query, which this function does not touch. # from .run_recipe()'s own query, which this function does not touch.
paging <- .validate_pagination(limit, offset)
limit <- paging$limit
offset <- paging$offset
if (!is.null(limit)) { if (!is.null(limit)) {
limit <- as.integer(limit)
if (length(limit) != 1L || is.na(limit) || limit < 0L) {
cli::cli_abort("`limit` must be a single non-negative integer.",
class = "uscogdata_invalid_pagination")
}
offset <- if (is.null(offset)) 0L else as.integer(offset)
if (length(offset) != 1L || is.na(offset) || offset < 0L) {
cli::cli_abort("`offset` must be a single non-negative integer.",
class = "uscogdata_invalid_pagination")
}
if (complete) { if (complete) {
cli::cli_abort(c( cli::cli_abort(c(
"`limit`/`offset` cannot be combined with `complete = TRUE`.", "`limit`/`offset` cannot be combined with `complete = TRUE`.",
@@ -466,24 +459,14 @@ cog_spending <- function(govid = NULL, years, category = NULL,
limit = limit, offset = offset) limit = limit, offset = offset)
result <- tibble::as_tibble(DBI::dbGetQuery(con, sql)) result <- tibble::as_tibble(DBI::dbGetQuery(con, sql))
if (!is.null(limit)) { if (!is.null(limit)) {
# COUNT(*) OVER() rides along as an ordinary column so the total comes paged <- .take_pagination_total(result, con, function() {
# from the same scan when this page has any rows -- see .build_verb_sql(view, subtype_col, cohort, years,
# .build_verb_sql(). An empty page (offset past the end) carries no if (all_categories) NULL else category,
# such row to read it from, so that one case falls back to a second, ig_view, subtype_scope,
# unpaginated COUNT(*) query rather than reporting a wrong zero. all_categories = all_categories)
if (nrow(result) > 0L) { })
total_rows <- result$pagination_total_rows[[1]] result <- paged$result
result$pagination_total_rows <- NULL total_rows <- paged$total_rows
} else {
count_sql <- sprintf(
"SELECT COUNT(*) AS n FROM (%s) AS _uncounted",
.build_verb_sql(view, subtype_col, cohort, years,
if (all_categories) NULL else category,
ig_view, subtype_scope,
all_categories = all_categories)
)
total_rows <- as.integer(DBI::dbGetQuery(con, count_sql)$n[[1]])
}
} }
} }
@@ -873,22 +856,9 @@ cog_spending <- function(govid = NULL, years, category = NULL,
# matching row across the network only to slice and discard most of it # matching row across the network only to slice and discard most of it
# afterward (the pattern behind the 2026-08-06 production incident: a # afterward (the pattern behind the 2026-08-06 production incident: a
# 193,105-row/194-page sweep re-ran the full query and re-listified every # 193,105-row/194-page sweep re-ran the full query and re-listified every
# row on EVERY page). COUNT(*) OVER() rides along as an ordinary column so # row on EVERY page). See .paginate_sql() in R/pagination.R for why the
# the caller gets the true total from this same scan -- see the call site # wrapping is an outer SELECT rather than a bare LIMIT on base_sql.
# in .verb_spendrev(), which reads it off row 1 and strips it back out. .paginate_sql(base_sql, limit, offset)
# The outer SELECT * wrapping (rather than appending LIMIT/OFFSET directly
# to base_sql) is what makes COUNT(*) OVER() see the post-GROUP-BY row
# count, not the pre-aggregation one.
if (is.null(limit)) {
base_sql
} else {
sprintf(
"SELECT *, COUNT(*) OVER() AS pagination_total_rows
FROM (%s) AS _paged
LIMIT %d OFFSET %d",
base_sql, limit, offset
)
}
} }
#' Join population onto a result and derive the per-capita columns. #' Join population onto a result and derive the per-capita columns.
+30 -5
View File
@@ -1,6 +1,7 @@
# uscogdata # uscogdata
<!-- badges: start --> <!-- badges: start -->
[![R-CMD-check](https://github.com/civilytics/uscogdata/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/civilytics/uscogdata/actions/workflows/R-CMD-check.yaml)
[![r-universe](https://civilytics.r-universe.dev/badges/uscogdata)](https://civilytics.r-universe.dev/uscogdata) [![r-universe](https://civilytics.r-universe.dev/badges/uscogdata)](https://civilytics.r-universe.dev/uscogdata)
[![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE.md) [![License: MIT](https://img.shields.io/badge/license-MIT-blue.svg)](LICENSE.md)
<!-- badges: end --> <!-- badges: end -->
@@ -18,7 +19,7 @@ carries provenance describing what was converted, what was aggregated, and
which known series breaks intersect your query. which known series breaks intersect your query.
**Scope:** government types 0–3 (state, county, municipality, township). **Scope:** government types 0–3 (state, county, municipality, township).
56 fiscal years, 46,148,034 rows, 190.6 MB. There is no source data for FY1968 56 fiscal years, 46,148,034 rows, ~201 MB. There is no source data for FY1968
or FY1969. Special districts (type 4) and school districts (type 5) are or FY1969. Special districts (type 4) and school districts (type 5) are
excluded pending validation. excluded pending validation.
@@ -85,14 +86,38 @@ cog_explain(spend)
| | Remote (default) | Mirrored | | | Remote (default) | Mirrored |
|---|---|---| |---|---|---|
| Setup | none | `cog_mirror(dest)`, 190.6 MB once | | Setup | none | `cog_mirror(dest)`, ~201 MB once |
| Disk used | **0 MB** — HTTP range requests only | 190.6 MB | | Disk used | **0 MB** — HTTP range requests only | ~201 MB |
| Per query | ~4 s (one government, one year)<br>~6 s (one government, 23 years) | local speed | | Opening a session | ~7.5 s | ~0.1 s |
| One government, one year | ~4 s | ~0.05 s |
| One government, full history | ~7 s | ~0.1 s |
| Later queries, same session | ~1.5 s | ~0.05 s |
| Good for | trying it out, teaching, one-off questions | repeated analysis, offline work, reproducibility | | Good for | trying it out, teaching, one-off questions | repeated analysis, offline work, reproducibility |
**A local mirror is roughly 60–80x faster, and it is one function call.** That is
by far the largest difference any of these settings makes. If you are going to
ask more than a handful of questions, mirror first.
Measured 2026-08-10 on a 16-core Linux workstation against the published corpus
(schema v7, `pipeline_commit 3d28ddd`), fresh R session per arm. A one-off
question costs about **12 seconds end to end remotely and 0.15 seconds
mirrored**, session setup included.
Two things the per-query rows hide:
- **Opening the session is the single largest remote cost** — larger than any
one query. It fetches the manifest and registers 23 SQL views over HTTPS, and
it lands on your first query, not on `library(uscogdata)`.
- **The cost is network round-trips, not scanning.** A repeat query against
partitions this session has already touched is ~1.5 s rather than ~4 s, and a
full-history query costs ~7 s whether it runs first or last. What you are
paying for is reaching each of the 56 yearly files over HTTPS the first time.
Nothing is written to disk in remote mode: DuckDB fetches the parquet footer, Nothing is written to disk in remote mode: DuckDB fetches the parquet footer,
works out which row groups it needs, and reads only those. Nothing is cached works out which row groups it needs, and reads only those. Nothing is cached
between sessions either, so every query goes back to the network. between sessions either, so every query goes back to the network — and a session
that issues many remote queries in quick succession can be rate-limited by the
host (`HTTP Error: ... 429`). Both are further reasons to mirror for real work.
The default points at a public HuggingFace mirror of the corpus. If you would The default points at a public HuggingFace mirror of the corpus. If you would
rather not depend on a third party — for reproducibility, for an air-gapped rather not depend on a third party — for reproducibility, for an air-gapped
+15 -1
View File
@@ -13,7 +13,9 @@ cog_balances(
basis = c("harmonized", "raw"), basis = c("harmonized", "raw"),
recipe = NULL, recipe = NULL,
state = NULL, state = NULL,
type = NULL type = NULL,
limit = NULL,
offset = NULL
) )
} }
\arguments{ \arguments{
@@ -76,6 +78,14 @@ wide era to the modern one.}
and `govids_missing` are empty -- there is no id list to report against -- and `govids_missing` are empty -- there is no id list to report against --
and `provenance$scope$cohort` carries `state`, `type` and and `provenance$scope$cohort` carries `state`, `type` and
`n_governments` instead. A `govid`-named cohort reports exactly as before.} `n_governments` instead. A `govid`-named cohort reports exactly as before.}
\item{limit}{Maximum number of result rows to return, pushed into the SQL
rather than applied after materializing every row. `NULL` (default)
returns everything. Cannot be combined with `recipe` -- see `offset` and
`total_rows`.}
\item{offset}{Rows to skip before `limit` starts counting (0-based).
Ignored if `limit` is `NULL`; defaults to `0L` when `limit` is set.}
} }
\value{ \value{
Tibble with columns `year`, `canonical_govid`, `gov_name`, Tibble with columns `year`, `canonical_govid`, `gov_name`,
@@ -94,6 +104,10 @@ Tibble with columns `year`, `canonical_govid`, `gov_name`,
and `truncated` (the observed subtypes whose coverage falls short of the and `truncated` (the observed subtypes whose coverage falls short of the
requested years). `expenditure_concept`/`revenue_concept` are `NA` -- requested years). `expenditure_concept`/`revenue_concept` are `NA` --
holdings are a stock, not a flow, so neither concept vocabulary applies. holdings are a stock, not a flow, so neither concept vocabulary applies.
When `limit` is set, also carries a `total_rows` attribute: the full
unpaginated row count, computed by the same query (`COUNT(*) OVER()`)
rather than a second scan.
} }
\description{ \description{
Returns Census cash-and-security holdings (`category_type = "balance"`): Returns Census cash-and-security holdings (`category_type = "balance"`):
+24 -4
View File
@@ -4,7 +4,13 @@
\alias{cog_gov_search} \alias{cog_gov_search}
\title{Search for governments by name, state, and/or type} \title{Search for governments by name, state, and/or type}
\usage{ \usage{
cog_gov_search(name = NULL, state = NULL, type = NULL) cog_gov_search(
name = NULL,
state = NULL,
type = NULL,
limit = NULL,
offset = NULL
)
} }
\arguments{ \arguments{
\item{name}{Character vector of place name(s). Length 1 = utility mode; \item{name}{Character vector of place name(s). Length 1 = utility mode;
@@ -19,12 +25,26 @@ all entries; otherwise must match `length(name)`.}
in basket mode (recycles from length 1). Excluded types `4`/`5` (or in basket mode (recycles from length 1). Excluded types `4`/`5` (or
`"special_district"` / `"school_district"`) trigger an explanatory `"special_district"` / `"school_district"`) trigger an explanatory
message and an empty result.} message and an empty result.}
\item{limit}{Maximum number of rows to return, applied in SQL. `NULL`
(default) returns every match -- which, with no other filter, is the
entire crosswalk. Utility mode only: pagination has no meaning in basket
mode, where the result is one resolved row per requested name in input
order, and is refused there with class
`uscogdata_basket_pagination_conflict`.}
\item{offset}{Rows to skip before `limit` starts counting (0-based).
Ignored if `limit` is `NULL`; defaults to `0L` when `limit` is set.}
} }
\value{ \value{
A tibble of `canonical_fips_xwalk` rows. In utility mode, all A tibble of `canonical_fips_xwalk` rows. In utility mode, all
matches sorted by `population_acs` desc. In basket mode, resolved matches sorted by `population_acs` desc, ties broken by
rows in input order, with `attr(., "resolution")` set to the `canonical_govid`. In basket mode, resolved rows in input order, with
sidecar tibble. `attr(., "resolution")` set to the sidecar tibble.
When `limit` is set, carries a `total_rows` attribute: the full
unpaginated match count, computed by the same query (`COUNT(*) OVER()`)
rather than a second scan.
} }
\description{ \description{
Resolves human-readable place names into rows of `canonical_fips_xwalk`, Resolves human-readable place names into rows of `canonical_fips_xwalk`,
@@ -0,0 +1,178 @@
# tests/testthat/test-search-balances-pagination.R
#
# uscogdata#57. cog_spending()/cog_revenue() gained limit/offset in #39;
# cog_gov_search() and cog_balances() did not, so every consumer of those two
# was back to materialize-then-slice -- the exact pattern that wedged the
# production API for hours on 2026-08-06.
#
# cog_gov_search() was also the one verb with no LIMIT at all, so an
# unfiltered call returns the entire 40,336-row crosswalk by accident.
# --- cog_gov_search() -------------------------------------------------------
test_that("cog_gov_search() limit returns the first page of the unpaginated result", {
skip_if_no_corpus()
full <- cog_gov_search(state = "WI", type = "city")
skip_if(nrow(full) < 12L, "fixture has too few WI cities to page")
page <- cog_gov_search(state = "WI", type = "city", limit = 5L)
expect_equal(nrow(page), 5L)
expect_equal(page$canonical_govid, full$canonical_govid[1:5])
})
test_that("cog_gov_search() offset skips ahead without gaps or overlap", {
skip_if_no_corpus()
full <- cog_gov_search(state = "WI", type = "city")
skip_if(nrow(full) < 12L, "fixture has too few WI cities to page")
p1 <- cog_gov_search(state = "WI", type = "city", limit = 5L)
p2 <- cog_gov_search(state = "WI", type = "city", limit = 5L, offset = 5L)
expect_equal(p2$canonical_govid, full$canonical_govid[6:10])
expect_length(intersect(p1$canonical_govid, p2$canonical_govid), 0L)
})
test_that("walking every page reconstructs the unpaginated search exactly", {
skip_if_no_corpus()
full <- cog_gov_search(state = "WI", type = "city")
n <- nrow(full)
limit <- 7L
pages <- list()
offset <- 0L
repeat {
p <- cog_gov_search(state = "WI", type = "city", limit = limit, offset = offset)
if (nrow(p) == 0L) break
pages[[length(pages) + 1L]] <- p
offset <- offset + limit
if (offset > n + limit) stop("test runaway: paging did not terminate")
}
walked <- dplyr::bind_rows(pages)
expect_equal(nrow(walked), n)
expect_equal(walked$canonical_govid, full$canonical_govid)
})
test_that("cog_gov_search() total_rows reports the full unpaginated count", {
skip_if_no_corpus()
full <- cog_gov_search(state = "WI", type = "city")
page <- cog_gov_search(state = "WI", type = "city", limit = 3L)
expect_equal(attr(page, "total_rows"), nrow(full))
})
test_that("cog_gov_search() offset past the end reports the true total, not zero", {
skip_if_no_corpus()
full <- cog_gov_search(state = "WI", type = "city")
# No row survives to carry COUNT(*) OVER(), so this is the branch that has
# to fall back to a second count rather than reporting 0 rows out of 0.
page <- cog_gov_search(state = "WI", type = "city",
limit = 5L, offset = nrow(full) + 50L)
expect_equal(nrow(page), 0L)
expect_equal(attr(page, "total_rows"), nrow(full))
})
test_that("cog_gov_search() bounds an otherwise-unfiltered crosswalk sweep", {
skip_if_no_corpus()
# The reason this verb needed a limit most: with no filter it returns the
# whole crosswalk.
page <- cog_gov_search(limit = 10L)
expect_equal(nrow(page), 10L)
expect_gt(attr(page, "total_rows"), 10L)
})
test_that("cog_gov_search() orders by a total order, not population alone", {
skip_if_no_corpus()
# population_acs is not unique -- NA in particular repeats across many rows
# -- so paging on it alone can duplicate a row on one page and drop it from
# the next. The tiebreaker is what makes the sequence reproducible.
full <- cog_gov_search(state = "WI")
skip_if(nrow(full) < 5L, "fixture has too few WI governments")
expect_equal(cog_gov_search(state = "WI")$canonical_govid,
full$canonical_govid)
ties <- full[is.na(full$population_acs), ]
skip_if(nrow(ties) < 2L, "no tied rows in the fixture to order")
expect_false(is.unsorted(ties$canonical_govid))
})
test_that("cog_gov_search() refuses pagination in basket mode", {
skip_if_no_corpus()
expect_error(
cog_gov_search(name = c("MADISON CITY", "MILWAUKEE CITY"),
state = c("WI", "WI"), limit = 1L),
class = "uscogdata_basket_pagination_conflict"
)
})
test_that("cog_gov_search() rejects a malformed limit or offset", {
skip_if_no_corpus()
expect_error(cog_gov_search(state = "WI", limit = -1L),
class = "uscogdata_invalid_pagination")
expect_error(cog_gov_search(state = "WI", limit = 5L, offset = -1L),
class = "uscogdata_invalid_pagination")
})
# --- cog_balances() ---------------------------------------------------------
test_that("cog_balances() limit/offset walk the unpaginated result exactly", {
skip_if_no_corpus()
full <- cog_balances(years = 2019:2020, state = "WI", type = "city")
skip_if(nrow(full) < 6L, "fixture has too few WI city balance rows to page")
key <- c("year", "canonical_govid", "balance_subtype", "amt_nominal")
p1 <- cog_balances(years = 2019:2020, state = "WI", type = "city", limit = 3L)
p2 <- cog_balances(years = 2019:2020, state = "WI", type = "city",
limit = 3L, offset = 3L)
expect_equal(nrow(p1), 3L)
expect_equal(p1[key], full[1:3, key], ignore_attr = TRUE)
expect_equal(p2[key], full[4:6, key], ignore_attr = TRUE)
# The window-function column is an implementation detail and must not reach
# the caller's data frame.
expect_false("pagination_total_rows" %in% names(p1))
})
test_that("cog_balances() total_rows reports the full unpaginated count", {
skip_if_no_corpus()
full <- cog_balances(years = 2019:2020, state = "WI", type = "city")
page <- cog_balances(years = 2019:2020, state = "WI", type = "city", limit = 2L)
expect_equal(attr(page, "total_rows"), nrow(full))
})
test_that("cog_balances() offset past the end reports the true total", {
skip_if_no_corpus()
full <- cog_balances(years = 2019:2020, state = "WI", type = "city")
page <- cog_balances(years = 2019:2020, state = "WI", type = "city",
limit = 5L, offset = nrow(full) + 50L)
expect_equal(nrow(page), 0L)
expect_equal(attr(page, "total_rows"), nrow(full))
})
test_that("cog_balances() refuses pagination alongside a recipe", {
skip_if_no_corpus()
expect_error(
cog_balances(years = 2011, state = "WI", type = "city",
recipe = "cash_securities_z77_wide", limit = 5L),
class = "uscogdata_recipe_pagination_conflict"
)
})
test_that("cog_balances() rejects a malformed limit or offset", {
skip_if_no_corpus()
expect_error(cog_balances(years = 2019, state = "WI", type = "city", limit = -1L),
class = "uscogdata_invalid_pagination")
expect_error(cog_balances(years = 2019, state = "WI", type = "city",
limit = 5L, offset = -1L),
class = "uscogdata_invalid_pagination")
})
# --- Unchanged without the arguments ----------------------------------------
test_that("both verbs are unchanged when limit is not supplied", {
skip_if_no_corpus()
# The adoption contract for cog-api: NULL default, so a formals() probe can
# feature-detect without any call site changing behaviour.
s <- cog_gov_search(state = "WI", type = "city")
b <- cog_balances(years = 2019, state = "WI", type = "city")
expect_null(attr(s, "total_rows"))
expect_null(attr(b, "total_rows"))
expect_true(all(c("limit", "offset") %in% names(formals(cog_gov_search))))
expect_true(all(c("limit", "offset") %in% names(formals(cog_balances))))
})